I am the sole programmer at my school, so when I encounter a problem, it is up to me to figure it out.
I cannot figure out how to program my teleop program to run the joysticks and the if(joy1Btn(5) == 1) commands at once.
In other words, I cannot figure out how to move the robot, use a button, then move it again or use another button.
This is my program:

Looking at your code, I assume you want to avoid waiting for the encoder to reach its target in the toby() function as well as the 2 second wait for your ball shooter.

There are several ways to tackle this and most of them involve tasks.
In ROBOTC, a task is analogous to a thread so that each task of the same priority time share the CPU. So if your main task contained the code for the drive train, you could have a separate task for the other functions which contain separate while loops or wait statements.

Note that you probably only want to get the joystick settings (the latest packet) from a single task (usually your main task) even if other tasks read the current joystick values. I did notice a bug in your code where you appear to be getting the joystick settings only once at the beginning of your main task before the endless loop. You want to move that into the top of the loop so that you can get the latest joystick values on every iteration of the loop.

That is, change this:
to something like this:

Thanks. I have a new problem, but not as major. I want my buttons to control the movement of the motors directly. For example, if I press button four, I want motor B to run only while I press button four. Once I release button four, then I want motor B to stop.

That should be fairly straightforward.

For example: